HADDOCK (High Ambiguity Driven protein-protein DOCKing) is an information-driven flexible docking approach for the modeling of biomolecular complexes. It is available, with other software tools developed in the NMR Research Group of Utrecht University, here: http://haddock.chem.uu.nl/
PipeAlign is a protein family analysis tool integrating a five step process ranging from the search for sequence homologues in protein and 3D structure databases to the definition of the hierarchical relationships within and between subfamilies. The complete, automatic pipeline takes a single sequence or a set of sequences as input and constructs a high-quality, validated MACS (multiple alignment of complete sequences) in which sequences are clustered into potential functional subgroups. http://bips.u-strasbg.fr/PipeAlign/
Proteopedia provides an animated, annotated reference resource for understanding protein 3D structure-function relationships. Linked to PDB data, Proteopedia pages can be edited quickly and simply.
http://www.proteopedia.org/wiki/index.php/Main_Page
For help with Protopedia, contact:
li.ca.nnamziew@sidoh.nare
Information on the new Spine 2 sample holder is now available at
http://www.embl.fr/spinesampleholder/